Harnessing deep learning for population genetic inference
Huang, X., Rymbekova, A., Dolgova, O., Lao, O., Kuhlwilm, M., 2023. Harnessing deep learning for population genetic inference. Nature Reviews Genetics. read more
Huang, X., Rymbekova, A., Dolgova, O., Lao, O., Kuhlwilm, M., 2023. Harnessing deep learning for population genetic inference. Nature Reviews Genetics. read more
Our HEAS Seed Grant initiative will support pilot projects that will induce more collaborative work in our network. We want to keep it simple and unbureaucratic. Applications for the HEAS Seed Grants will be accepted three times a year. The deadlines for 2025 are 28th February, 30th June and 31st October. Applications are open to all HEAS PhDs, Postdocs, and PIs. Each seed grant will be for a sum up to € 3,000. There will be a minimum of three Seed Grants offered each time. You may submit up to two submissions if: You don't already have an active HEAS Seed Grant from a previous round You are not the lead on both (i.e. you can be a lead on one and a collabarator on another) Proposals will be evaluated by all members of the HEAS Management Board, the best three proposals will be funded. Grantees will be announced in the NEWS Section of the HEAS website. Guidelines The short proposals should have: 1 or 2 pages maximum, provide a summary of what will be done, what the target of the pilot project is (e.g., preparation for grant applications, proof of concept, etc.), and particularly should make clear the bridging aspect of the intended interdisciplinary work in the framework of HEAS. Budget: Please include a breakdown of items in the budget part of…
Lipson, M., Ringbauer, H., Lucarini, G., Aouadi, N., Aoudia, L., Belhouchet, L., Cheronet, O., Dahmani, A.-R., Genchi, F., La Pastina, F., Lucci, M., de Lumley, H., Mansouri, N., Nava, A., Touj, F., Mallick, S., Rohland, N., Coppa, A., Pinhasi, R., Reich, D., 2025. High continuity of forager ancestry in the Neolithic period of the eastern Maghreb. Nature. read more
Filzwieser, R., Ruß, D., Kucera, M., Doneus, M., Hasenhündl, G., Verhoeven, G.J., Zotti, G., Lenzhofer, A., Stüttler, G., Pisz, M., Neubauer, W., 2022. History and Archaeology in Discourse on the Dernberg–Reconstructing the Historical Landscape of a Medieval Motte-and-Bailey Castle and Deserted Village. Heritage 5 (3), 2123–2141. doi:10.3390/heritage5030111. read more
Hagmann, D., 2025. Home is where my villa is: a machine learning-based predictive suitability map for Roman features in Northern Noricum (ca. 50–500 CE/Lower Austria/AUT). Journal of Maps 21, 2487444. read more
Kitagawa, K., Tejero, J.-M., Yeshurun, R., Walter, R., Huber, H., Andrews, R., Magliozzi, N., Doyon, L., Homo sapiens could have hunted with bow and arrow from the onset of the early Upper Palaeolithic in Eurasia. iScience. read more
Mylopotamitaki, D., Weiss, M., Fewlass, H., Zavala, E.I., Rougier, H., Sümer, A.P., Hajdinjak, M., Smith, G.M., Ruebens, K., Sinet-Mathiot, V., Pederzani, S., Essel, E., Harking, F.S., Xia, H., Hansen, J., Kirchner, A., Lauer, T., Stahlschmidt, M., Hein, M., Talamo, S., Wacker, L., Meller, H., Dietl, H., Orschiedt, J., Olsen, J.V., Zeberg, H., Prüfer, K., Krause, J., Meyer, M., Welker, F., McPherron, S.P., Schüler, T., Hublin, J.-J., 2024. Homo sapiens reached the higher latitudes of Europe by 45,000 years ago. Nature 626, 341-346. read more
Bühler, B, Kirchengast, S., 2022. Horse-riding as a habitual activity among the early medieval Avar population of the cemetery of Csokorgasse (Vienna): Sex and chronological differences. International Journal of Osteoarchaeology read more
Gaffney, D., Tanudirjo, D.A., Djami, E.N.I., Mas'ud, Z., Macap, A.R., Russell, T., Dailom, M., Ray, Y., Higham, T., Bradshaw, F., Petchey, F., Florin, S.A., Roberts, P., Lucas, M., Tromp, M., Greig, K., Xhauflair, H., Montenegro, A., Hall, R., Boulanger, C., Ono, R., Oertle, A., Scholz, D., Spitzer, M., Szabo, K., Bertelli, I., Ribechini, E., Haberle, S., 2024. Human dispersal and plant processing in the Pacific 55 000–50 000 years ago. Antiquity, 1-20. read more
Doneus, M., Höfle, B., Kempf, D., Daskalakis, G, Shinoto, M . (2022). "Human‐in‐the‐loop development of spatially adaptive ground point filtering pipelines—An archaeological case study." Archaeological Prospection. read more
Hagmann, D., 2025. I walk an ancient road: A straightforward methodology for analyzing intra- and inter-regional connectivity systems along Roman Frontier Zones (c. 1st—5th century AD). Journal of Archaeological Science 176, 106151. read more
Yeshurun, R., Doyon, L., Tejero, J.-M., Walter, R., Huber, H., Andrews, R., Kitagawa, K., 2024. Identification and quantification of projectile impact marks on bone: new experimental insights using osseous points. Archaeological and Anthropological Sciences 16, 43. read more
van der Sluis, L.G., McGrath, K., Thil, F., Cersoy, S., Pétillon, J.M., Zazzo, A., 2023. Identification and tentative removal of collagen glue in Palaeolithic worked bone objects: implications for ZooMS and radiocarbon dating. Scientific Reports 13, 22119. read more
Kuderna, L.F.K., Ulirsch, J.C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A.J., Gao, H., Kumar, A., Aguet, F., Christmas, M.J., Clawson, H., Haeussler, M., Janiak, M.C., Kuhlwilm, M., Orkin, J.D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rouselle, M., Silva, F.E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R.A., Raveendran, M., Jensen, A., Chuma, I.S., Horvath, J.E., Hvilsom, C., Juan, D., Frandsen, P., Schraiber, J.G., de Melo, F.R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., Valsecchi, J., Messias, M., da Silva, M.N.F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C.J., Zaramody, A., Jolly, C.J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J.H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., Zhang, G., Keyyu, J.D., Knauf, S., Le, M.D., Lizano, E., Merker, S., Navarro, A., Nadler, T., Khor, C.C., Lee, J., Tan, P., Lim, W.K., Kitchener, A.C., Zinner, D., Gut, I., Melin, A.D., Guschanski, K., Schierup, M.H., Beck, R.M.D., Karakikes, I., Wang, K.C., Umapathy, G., Roos, C., Boubli, J.P., Siepel, A., Kundaje, A., Paten, B., Lindblad-Toh, K., Rogers, J., Marques Bonet, T., Farh, K.K.-H., 2023. Identification of constrained sequence elements across 239 primate genomes. Nature. read more
Stahlschmidt, M.C., Mentzer, S.M., Heinrich, S., Cooper, A., Grote, M.N., McNeill, P.J., Wilder, J.C.B., Steele, T.E., 2023. Impact of a recent wildfire on tortoises at Cape Point, South Africa, and implications for the interpretation of heated bones in the archaeological record. Archaeological and Anthropological Sciences 15, 126. read more
Gallo, G., Ushakov, S.V., Navrotsky, A., Stahlschmidt, M.C., 2023. Impact of prolonged heating on the color and crystallinity of bone. Archaeological and Anthropological Sciences 15, 143. read more
Sawyer, S., Gelabert, P., Yakir, B., Lizcano, A.L., Sperduti, A., Bondioli, L., Cheronet, O., Neugebauer-Maresch, C., Teschler-Nicola, M., Novak, M., Pap, I., Szikossy, I., Hajdu, T., Meshorer, E., Carmel, L., Pinhasi, R., 2023. Improved detection of methylation in ancient DNA. bioRxiv, 2023.2010.2031.564722. read more
Sawyer, S., Gelabert, P., Yakir, B., Llanos-Lizcano, A., Sperduti, A., Bondioli, L., Cheronet, O., Neugebauer-Maresch, C., Teschler-Nicola, M., Novak, M., Pap, I., Szikossy, I., Hajdu, T., Moiseyev, V., Gromov, A., Zariņa, G., Meshorer, E., Carmel, L., Pinhasi, R., 2024. Improved detection of methylation in ancient DNA. Genome Biology 25, 261. read more
Fieder, M., Huber, S., 2023. Increasing pressure on US men for income in order to find a spouse. Biodemography and Social Biology, 1-19. read more
Doneus, N., Doneus, M., 2024. Intensively Cultivated Roman Villae Estates: Case Study of Medulin Bay (Istria, Croatia). Archaeological Prospection. read more
Wallner, M., Doneus, M., Kowatschek, I., Hinterleitner, A., Köstelbauer, F., Neubauer, W., 2022. Interdisciplinary Investigations of the Neolithic Circular Ditch Enclosure of Velm (Lower Austria). Remote Sensing 14, 2657. read more
Llanos-Lizcano, A., Hämmerle, M., Sperduti, A., Sawyer, S., Zagorc, B., Özdoğan, K. T., Guellil, M., Cheronet, O., Kuhlwilm, M., Pinhasi, R., & Gelabert, P. (2025). Intra-individual variability in ancient plasmodium DNA recovery highlights need for enhanced sampling. Scientific Reports, 15(1), read more
Abrams, G., Devièse, T., Pirson, S., De Groote, I., Flas, D., Jungels, C., Jadin, I., Cattelain, P., Bonjean, D., Mathys, A., Semal, P., Higham, T., Di Modica, K., 2024. Investigating the co-occurrence of Neanderthals and modern humans in Belgium through direct radiocarbon dating of bone implements. Journal of Human Evolution 186, 103471. read more
Horn, L., Windhager, S., Juricka, N., Bugnyar, T., Massen, J.J., Markova, G., 2024. Investigating the effects of prenatal testosterone exposure (via 2D: 4D) and socio-relational factors on 3–6-year-old preschoolers' prosocial choices. Early Human Development, 106055. read more
Jetzinger, D., Krenn-Leeb, A., Lindinger, V., Weßling, R., Peresson, M., Supper, R., Roetzel, R., Peticzka, R., 2023. Is this settlement intersected by a ditch? A comparison between magnetic prospection data, ALS data, and archaeological and geological excavation results from the Early Bronze Age fortified hilltop settlement of Ratzersdorf, Lower Austria, Advances in On-and Offshore Archaeological Prospection: Proceedings of the 15th International Conference on Archaeological Prospection, pp. 143-147. read more
Schwall, C., Brandl, M., Börner, M., Lindauer, S., Deckers, K., David-Cuny, H., Yousif, E., Jasim, S.A., Horejs, B., 2024. Kalba: research on trade networks of a prehistoric coastal community on the Gulf of Oman, United Arab Emirates. Antiquity, 1-8. read more
Wang Naihui, Xu Yang, Tang Zhuowei, He Cunding, Hu Xin, Cui Yinqiu and Douka Katerina 2023 Large-scale application of palaeoproteomics (Zooarchaeology by Mass Spectrometry; ZooMS) in two Palaeolithic faunal assemblages from ChinaProc. R. Soc. B.2902023112920231129 read more
Sharif, M.B., Mohaseb, A.F., Orlando, L., Saliari, K., Kunst, G.K., Czeika, S., Mashkour, M., Cucchi, T., Peters, J., Trixl, S., Mohandesan, E., 2025. Late Iron Age and Roman equine breeding north of the Alps: Genetic insights and cultural implications. iScience 28. read more
Mas, B., Mangado, X., de la Torre, M.S., Tejero, J.-M., Fullola, J.M., Allué, E., 2023. Late Paleolithic hunter-gatherers’ resilience in the face of the transformation of the vegetation landscape and climate change in the Pre-Pyrenees. Quaternary Science Reviews 317, 108276. read more
McGrath, K., van der Sluis, L.G., Lefebvre, A., Charpentier, A., Rodrigues, A.S.L., Álvarez-Fernández, E., Baleux, F., Berganza, E., Chauvière, F.-X., Dachary, M., Duarte Matías, E., Houmard, C., Marín-Arroyo, A.B., de la Rasilla Vives, M., Tapia, J., Thil, F., Tombret, O., Torres-Iglesias, L., Speller, C., Zazzo, A., Pétillon, J.-M., 2025. Late Paleolithic whale bone tools reveal human and whale ecology in the Bay of Biscay. Nature Communications 16, 4646. read more
Swami, V., Stieger, S., Voracek, M., Aavik, T., Abdollahpour Ranjbar, H., Adebayo, S.O., Afhami, R., Ahmed, O., Aimé, A., Akel, M., Al Halbusi, H., Alexias, G., Ali, K.F., Alp-Dal, N., Alsalhani, A.B., Álvarez-Solas, S., Amaral, A.C.S., Andrianto, S., Aspden, T., Argyrides, M., Aruta, J.J.B.R., Atkin, S., Ayandele, O., Baceviciene, M., Bahbouh, R., Ballesio, A., Barron, D., Bellard, A., Bender, S.S., Beydaǧ, K.D., Birovljević, G., Blackburn, M.-È., Borja-Alvarez, T., Borowiec, J., Bozogáňová, M., Bratland-Sanda, S., Browning, M.H.E.M., Brytek-Matera, A., Burakova, M., Çakır-Koçak, Y., Camacho, P., Camilleri, V.E., Cazzato, V., Cerea, S., Chaiwutikornwanich, A., Chaleeraktrakoon, T., Chambers, T., Chen, Q.-W., Chen, X., Chien, C.-L., Chobthamkit, P., Choompunuch, B., Compte, E.J., Corrigan, J., Cosmas, G., Cowden, R.G., Czepczor-Bernat, K., Czub, M., da Silva, W.R., Dadfar, M., Dalley, S.E., Dany, L., Datu, J.A.D., de Carvalho, P.H.B., Coelho, G.L.d.H., De Jesus, A.O.S., Debbabi, S.H., Dhakal, S., Di Bernardo, F., Dimitrova, D.D., Dion, J., Dixson, B., Donofrio, S.M., Drysch, M., Du, H., Dzhambov, A.M., El-Jor, C., Enea, V., Eskin, M., Farbod, F., Farrugia, L., Fian, L., Fisher, M.L., Folwarczny, M., Frederick, D.A., Fuller-Tyszkiewicz, M., Furnham, A., García, A.A., Geller, S., Ghisi, M., Ghorbani, A., Gomez Martinez, M.A., Gradidge, S., Graf, S., Grano, C., Gyene, G., Hallit, S., Hamdan, M., Handelzalts, J.E., Hanel, P.H.P., Hawks, S.R., Hekmati, I., Helmy, M., Hill, T., Hina, F., Holenweger, G., Hřebíčková,…
Hämmerle, M., Rymbekova, A., Gelabert, P., Sawyer, S., Cheronet, O., Bernardi, P., Calvignac-Spencer, S., Kuhlwilm, M., Guellil, M., Pinhasi, R., 2024. Link between Monkeypox Virus Genomes from Museum Specimens and 1965 Zoo Outbreak. Emerging Infectious Disease journal 30, 815. read more
Slimak, L., Vimala, T., Seguin-Orlando, A., Metz, L., Zanolli, C., Joannes-Boyau, R., Frouin, M., Arnold, L.J., Demuro, M., Devièse, T., Comeskey, D., Buckley, M., Camus, H., Muth, X., Lewis, J.E., Bocherens, H., Yvorra, P., Tenailleau, C., Duployer, B., Coqueugniot, H., Dutour, O., Higham, T., Sikora, M., 2024. Long genetic and social isolation in Neanderthals before their extinction. Cell Genomics 4. read more
Gyuris, B., Vyazov, L., Türk, A., Flegontov, P., Szeifert, B., Langó, P., Mende, B.G., Csáky, V., Chizhevskiy, A.A., Gazimzyanov, I.R., Khokhlov, A.A., Kolonskikh, A.G., Matveeva, N.P., Ruslanova, R.R., Rykun, M.P., Sitdikov, A., Volkova, E.V., Botalov, S.G., Bugrov, D.G., Grudochko, I.V., Komar, O., Krasnoperov, A.A., Poshekhonova, O.E., Chikunova, I., Sungatov, F., Stashenkov, D.A., Zubov, S., Zelenkov, A.S., Ringbauer, H., Cheronet, O., Pinhasi, R., Akbari, A., Rohland, N., Mallick, S., Reich, D., Szécsényi-Nagy, A., 2025. Long shared haplotypes identify the southern Urals as a primary source for the 10th-century Hungarians. Cell 188, 6064-6078.e6011. read more
Schaefer, K., Seiser, V.M., Prucha, S., Kerschbaumer, V., Fink, B., Windhager, S., 2024. Male facial cues to physical strength in Europe: Medium‐strength preference and higher aggressiveness attribution to the weakest. American journal of human biology, e24040. read more
Schahbasi, A., Huber,S., Fieder, M., (2022). "Marriage in the Melting Pot: An Evolutionary Approach to European Ancestry, Homogamy, and Fertility in the United States." Frontiers in Psychology 13. read more
Oberreiter, V., Gelabert, P., Brück, F., Franz, S., Zelger, E., Szedlacsek, S., Cheronet, O., Cano, F.T., Exler, F., Zagorc, B., Karavanić, I., Banda, M., Gasparyan, B., Straus, L.G., Gonzalez Morales, M.R., Kappelman, J., Stahlschmidt, M., Rattei, T., Kraemer, S.M., Sawyer, S., Pinhasi, R., 2024. Maximizing efficiency in sedimentary ancient DNA analysis: a novel extract pooling approach. Scientific Reports 14, 19388. read more
Huber, B., Luciani, M., Abualhassan, A.M., Giddings Vassão, D., Fernandes, R., Devièse, T., 2025. Metabolic profiling reveals first evidence of fumigating drug plant Peganum harmala in Iron Age Arabia. Communications Biology 8, 1-8. read more
Pérez-Ramallo, P., Grandal-d´Anglade, A., Organista, E., Santos, E., Chivall, D., Rodríguez-Varela, Götherstrom, A., Etxeberria, F., Ilgner, J., Fernandez, R., Arsuaga, J-L., Le Roux, P., Higham, T., Beaumont, J., Koon, H. and Roberts, P. 2022. Multi-isotopic study of the earliest mediaeval inhabitants of Santiago de Compostela (Galicia, Spain). Archaeol Anthropol Sci 14, 214. read more
Stojanovski, D., Horejs, B., 2025. New “Balkan Fashion” Developing Through the Neolithization Process: The Ceramic Annulets of Amzabegovo and Svinjarička Čuka. Open Archaeology 11. read more